J4_6FTG_010
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- CUAAG*UUGAU*ACC*GGG
- Length
- 16 nucleotides
- Bulged bases
- 6FTG|1|u|A|4234
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6FTG_010 not in the Motif Atlas
- Homologous match to J4_8P9A_019
- Geometric discrepancy: 0.1876
- The information below is about J4_8P9A_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_59590.1
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-F-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6FTG|1|u|C|4231
6FTG|1|u|U|4232
6FTG|1|u|A|4233
6FTG|1|u|A|4234
6FTG|1|u|G|4235
*
6FTG|1|u|U|4289
6FTG|1|u|U|4290
6FTG|1|u|G|4291
6FTG|1|u|A|4292
6FTG|1|u|U|4293
*
6FTG|1|u|A|4317
6FTG|1|u|C|4318
6FTG|1|u|C|4319
*
6FTG|1|u|G|4328
6FTG|1|u|G|4329
6FTG|1|u|G|4330
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain T
- eL21
- Chain b
- 60S ribosomal protein L29
- Chain o
- eL42
Coloring options: