J4_6NUO_002

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

6NUO|1|QA|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_6NUO_002 not in the Motif Atlas

Homologous match to J4_4LFB_002

Geometric discrepancy: 0.1266

The information below is about J4_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_88771.1

Basepair signature

cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW

Number of instances in this motif group

1

Unit IDs

6NUO|1|QA|G|142
6NUO|1|QA|A|143
6NUO|1|QA|G|144
*
6NUO|1|QA|C|178
6NUO|1|QA|A|179
6NUO|1|QA|U|180
6NUO|1|QA|G|181
6NUO|1|QA|U|182
6NUO|1|QA|G|183
*
6NUO|1|QA|C|194
6NUO|1|QA|A|195
6NUO|1|QA|A|196
6NUO|1|QA|A|197
6NUO|1|QA|G|198
*
6NUO|1|QA|C|219
6NUO|1|QA|G|220
6NUO|1|QA|C|221

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20