J4_6NUO_019
3D structure
- PDB id
- 6NUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CU*GAGUAC*GGAAUCUG*UAAG
- Length
- 20 nucleotides
- Bulged bases
- 6NUO|1|YA|U|432
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6NUO_019 not in the Motif Atlas
- Homologous match to J4_9DFE_001
- Geometric discrepancy: 0.0951
- The information below is about J4_9DFE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_94698.1
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6NUO|1|YA|C|257
6NUO|1|YA|U|258
*
6NUO|1|YA|G|397
6NUO|1|YA|A|398
6NUO|1|YA|G|399
6NUO|1|YA|U|400
6NUO|1|YA|A|401
6NUO|1|YA|C|402
*
6NUO|1|YA|G|426
6NUO|1|YA|G|427
6NUO|1|YA|A|428
6NUO|1|YA|A|429
6NUO|1|YA|U|430
6NUO|1|YA|C|431
6NUO|1|YA|U|432
6NUO|1|YA|G|433
*
6NUO|1|YA|U|448
6NUO|1|YA|A|449
6NUO|1|YA|A|450
6NUO|1|YA|G|451
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
- Chain YI
- 50S ribosomal protein L9
Coloring options: