J4_6QNR_025
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 6QNR|1|1H|G|2395
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6QNR_025 not in the Motif Atlas
- Homologous match to J4_4WF9_008
- Geometric discrepancy: 0.1642
- The information below is about J4_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6QNR|1|1H|C|2298
6QNR|1|1H|A|2299
6QNR|1|1H|A|2300
6QNR|1|1H|A|2301
6QNR|1|1H|G|2302
*
6QNR|1|1H|C|2356
6QNR|1|1H|U|2357
6QNR|1|1H|G|2358
6QNR|1|1H|A|2359
6QNR|1|1H|C|2360
*
6QNR|1|1H|G|2383
6QNR|1|1H|G|2384
6QNR|1|1H|G|2385
*
6QNR|1|1H|C|2394
6QNR|1|1H|G|2395
6QNR|1|1H|G|2396
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain A8
- 50S ribosomal protein L18
- Chain I8
- 50S ribosomal protein L27
- Chain O8
- 50S ribosomal protein L33
- Chain Q8
- 50S ribosomal protein L35
Coloring options: