J4_6W6P_001
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GAGUAC*GGAAUCCG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 6W6P|1|A|C|445
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6W6P_001 not in the Motif Atlas
- Homologous match to J4_4WF9_001
- Geometric discrepancy: 0.1186
- The information below is about J4_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_94698.2
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
6W6P|1|A|C|271
6W6P|1|A|C|272
*
6W6P|1|A|G|410
6W6P|1|A|A|411
6W6P|1|A|G|412
6W6P|1|A|U|413
6W6P|1|A|A|414
6W6P|1|A|C|415
*
6W6P|1|A|G|439
6W6P|1|A|G|440
6W6P|1|A|A|441
6W6P|1|A|A|442
6W6P|1|A|U|443
6W6P|1|A|C|444
6W6P|1|A|C|445
6W6P|1|A|G|446
*
6W6P|1|A|C|461
6W6P|1|A|A|462
6W6P|1|A|A|463
6W6P|1|A|G|464
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Y
- 50S ribosomal protein L28
Coloring options: