J4_6W6P_009
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAG*UUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 6W6P|1|A|A|2302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_6W6P_009 not in the Motif Atlas
- Homologous match to J4_9DFE_009
- Geometric discrepancy: 0.139
- The information below is about J4_9DFE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6W6P|1|A|C|2299
6W6P|1|A|A|2300
6W6P|1|A|A|2301
6W6P|1|A|A|2302
6W6P|1|A|G|2303
*
6W6P|1|A|U|2357
6W6P|1|A|U|2358
6W6P|1|A|G|2359
6W6P|1|A|A|2360
6W6P|1|A|C|2361
*
6W6P|1|A|G|2384
6W6P|1|A|G|2385
6W6P|1|A|G|2386
*
6W6P|1|A|C|2395
6W6P|1|A|G|2396
6W6P|1|A|G|2397
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L33
- Chain 5
- 50S ribosomal protein L35
- Chain P
- 50S ribosomal protein L18
- Chain X
- 50S ribosomal protein L27
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