J4_7AZO_002
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAG*CAUGUG*CAAAG*CGC
- Length
- 17 nucleotides
- Bulged bases
- 7AZO|1|16SA|A|849
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZO_002 not in the Motif Atlas
- Homologous match to J4_4LFB_002
- Geometric discrepancy: 0.2071
- The information below is about J4_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_88771.1
- Basepair signature
- cWW-tSS-cWW-tSS-cWW-cWW-tWH-tWH-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
7AZO|1|16SA|G|782
7AZO|1|16SA|A|783
7AZO|1|16SA|G|784
*
7AZO|1|16SA|C|818
7AZO|1|16SA|A|819
7AZO|1|16SA|U|820
7AZO|1|16SA|G|821
7AZO|1|16SA|U|822
7AZO|1|16SA|G|823
*
7AZO|1|16SA|C|846
7AZO|1|16SA|A|847
7AZO|1|16SA|A|848
7AZO|1|16SA|A|849
7AZO|1|16SA|G|850
*
7AZO|1|16SA|C|860
7AZO|1|16SA|G|861
7AZO|1|16SA|C|862
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S20A
- 30S ribosomal protein S20
Coloring options: