J4_7AZO_015
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAAAG*CUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7AZO_015 not in the Motif Atlas
- Homologous match to J4_4WF9_008
- Geometric discrepancy: 0.1692
- The information below is about J4_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7AZO|1|23SA|C|2300
7AZO|1|23SA|A|2301
7AZO|1|23SA|A|2302
7AZO|1|23SA|A|2303
7AZO|1|23SA|G|2304
*
7AZO|1|23SA|C|2358
7AZO|1|23SA|U|2359
7AZO|1|23SA|G|2360
7AZO|1|23SA|A|2361
7AZO|1|23SA|C|2362
*
7AZO|1|23SA|G|2385
7AZO|1|23SA|G|2386
7AZO|1|23SA|G|2387
*
7AZO|1|23SA|C|2396
7AZO|1|23SA|G|2397
7AZO|1|23SA|G|2398
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L18A
- 50S ribosomal protein L18
- Chain L27A
- 50S ribosomal protein L27
- Chain L33A
- 50S ribosomal protein L33
- Chain L35A
- 50S ribosomal protein L35
Coloring options: