J4_7OW7_011
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUAAG*UUGA(PSU)*ACC*GGG
- Length
- 16 nucleotides
- Bulged bases
- 7OW7|1|A|A|4234
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7OW7_011 not in the Motif Atlas
- Homologous match to J4_8P9A_019
- Geometric discrepancy: 0.2013
- The information below is about J4_8P9A_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_59590.1
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-F-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7OW7|1|A|C|4231
7OW7|1|A|U|4232
7OW7|1|A|A|4233
7OW7|1|A|A|4234
7OW7|1|A|G|4235
*
7OW7|1|A|U|4289
7OW7|1|A|U|4290
7OW7|1|A|G|4291
7OW7|1|A|A|4292
7OW7|1|A|PSU|4293
*
7OW7|1|A|A|4317
7OW7|1|A|C|4318
7OW7|1|A|C|4319
*
7OW7|1|A|G|4328
7OW7|1|A|G|4329
7OW7|1|A|G|4330
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain G
- 60S ribosomal protein L5
- Chain N
- 60S ribosomal protein L21
- Chain V
- 60S ribosomal protein L29
- Chain i
- 60S ribosomal protein L36a
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