J4_7P7R_001

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC*GAGUAC*GGAAUCCG*CAAG

Length

20 nucleotides

Bulged bases

7P7R|1|A|C|444

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7P7R_001 not in the Motif Atlas

Homologous match to J4_4WF9_001

Geometric discrepancy: 0.1284

The information below is about J4_4WF9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_94698.2

Basepair signature

cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7P7R|1|A|C|270
7P7R|1|A|C|271
*
7P7R|1|A|G|409
7P7R|1|A|A|410
7P7R|1|A|G|411
7P7R|1|A|U|412
7P7R|1|A|A|413
7P7R|1|A|C|414
*
7P7R|1|A|G|438
7P7R|1|A|G|439
7P7R|1|A|A|440
7P7R|1|A|A|441
7P7R|1|A|U|442
7P7R|1|A|C|443
7P7R|1|A|C|444
7P7R|1|A|G|445
*
7P7R|1|A|C|460
7P7R|1|A|A|461
7P7R|1|A|A|462
7P7R|1|A|G|463

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28