J4_7P7U_010
3D structure
- PDB id
- 7P7U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome with P-tRNA, state IV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAAAG*UUGAC*GGG*CGG
- Length
- 16 nucleotides
- Bulged bases
- 7P7U|1|A|A|2301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7P7U_010 not in the Motif Atlas
- Homologous match to J4_9DFE_009
- Geometric discrepancy: 0.1027
- The information below is about J4_9DFE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_98139.1
- Basepair signature
- cWW-F-cWW-tWW-tHH-cWW-cHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7P7U|1|A|C|2298
7P7U|1|A|A|2299
7P7U|1|A|A|2300
7P7U|1|A|A|2301
7P7U|1|A|G|2302
*
7P7U|1|A|U|2356
7P7U|1|A|U|2357
7P7U|1|A|G|2358
7P7U|1|A|A|2359
7P7U|1|A|C|2360
*
7P7U|1|A|G|2383
7P7U|1|A|G|2384
7P7U|1|A|G|2385
*
7P7U|1|A|C|2394
7P7U|1|A|G|2395
7P7U|1|A|G|2396
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain R
- 50S ribosomal protein L18
- Chain Y
- 50S ribosomal protein L27
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