J4_7UNU_010
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAG*UUGAC*GGU*AGG
- Length
- 16 nucleotides
- Bulged bases
- 7UNU|1|A|A|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7UNU_010 not in the Motif Atlas
- Homologous match to J4_5J7L_027
- Geometric discrepancy: 0.0916
- The information below is about J4_5J7L_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_04930.6
- Basepair signature
- cWW-F-F-tWW-tHH-cWW-cWW-cHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UNU|1|A|C|2272
7UNU|1|A|G|2273
7UNU|1|A|A|2274
7UNU|1|A|A|2275
7UNU|1|A|G|2276
*
7UNU|1|A|U|2330
7UNU|1|A|U|2331
7UNU|1|A|G|2332
7UNU|1|A|A|2333
7UNU|1|A|C|2334
*
7UNU|1|A|G|2357
7UNU|1|A|G|2358
7UNU|1|A|U|2359
*
7UNU|1|A|A|2368
7UNU|1|A|G|2369
7UNU|1|A|G|2370
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 5
- 50S ribosomal protein L33
- Chain 7
- 50S ribosomal protein L35
- Chain Q
- 50S ribosomal protein L18
- Chain Y
- 50S ribosomal protein L27
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