J4_9B50_013

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAG*UUGAC*GGU*AGG

Length

16 nucleotides

Bulged bases

9B50|1|BA|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|C|2285
9B50|1|BA|G|2286
9B50|1|BA|A|2287
9B50|1|BA|A|2288
9B50|1|BA|G|2289
*
9B50|1|BA|U|2343
9B50|1|BA|U|2344
9B50|1|BA|G|2345
9B50|1|BA|A|2346
9B50|1|BA|C|2347
*
9B50|1|BA|G|2370
9B50|1|BA|G|2371
9B50|1|BA|U|2372
*
9B50|1|BA|A|2381
9B50|1|BA|G|2382
9B50|1|BA|G|2383

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35

Chain BO

50S ribosomal protein L18

Chain BW

50S ribosomal protein L27