J4_9R3A_003
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 9R3A|1|A|C|550, 9R3A|1|A|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9R3A_003 not in the Motif Atlas
- Homologous match to J4_6CZR_013
- Geometric discrepancy: 0.1387
- The information below is about J4_6CZR_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_61885.5
- Basepair signature
- cWW-cWW-cWW-F-F-tHW-F-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9R3A|1|A|G|549
9R3A|1|A|C|550
9R3A|1|A|G|551
*
9R3A|1|A|C|738
9R3A|1|A|G|739
9R3A|1|A|A|740
9R3A|1|A|A|741
9R3A|1|A|A|742
9R3A|1|A|G|743
*
9R3A|1|A|C|784
9R3A|1|A|C|785
9R3A|1|A|G|786
9R3A|1|A|U|787
9R3A|1|A|A|788
9R3A|1|A|A|789
9R3A|1|A|A|790
9R3A|1|A|C|791
9R3A|1|A|G|792
9R3A|1|A|A|793
9R3A|1|A|U|794
9R3A|1|A|G|795
*
9R3A|1|A|C|853
9R3A|1|A|C|854
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
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