J5_6HTQ_010
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UAG*CGUGC*GAA*UA*UA
- Length
- 15 nucleotides
- Bulged bases
- 6HTQ|1|A|A|578, 6HTQ|1|A|U|606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_6HTQ_010 not in the Motif Atlas
- Homologous match to J5_4WF9_003
- Geometric discrepancy: 0.1417
- The information below is about J5_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_43153.6
- Basepair signature
- cWW-cWW-cWW-F-cWW-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6HTQ|1|A|U|577
6HTQ|1|A|A|578
6HTQ|1|A|G|579
*
6HTQ|1|A|C|604
6HTQ|1|A|G|605
6HTQ|1|A|U|606
6HTQ|1|A|G|607
6HTQ|1|A|C|608
*
6HTQ|1|A|G|621
6HTQ|1|A|A|622
6HTQ|1|A|A|623
*
6HTQ|1|A|U|1301
6HTQ|1|A|A|1302
*
6HTQ|1|A|U|2046
6HTQ|1|A|A|2047
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L13
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain S
- 50S ribosomal protein L22
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