J5_7O19_003
3D structure
- PDB id
- 7O19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GAC*GGCAG
- Length
- 23 nucleotides
- Bulged bases
- 7O19|1|AA|A|109, 7O19|1|AA|C|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7O19_003 not in the Motif Atlas
- Homologous match to J5_4LFB_002
- Geometric discrepancy: 0.0943
- The information below is about J5_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_58574.1
- Basepair signature
- cWW-F-tSS-cSS-F-cWW-cWW-cWW-F-F-cWW-F-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7O19|1|AA|C|58
7O19|1|AA|A|59
7O19|1|AA|A|60
7O19|1|AA|G|61
*
7O19|1|AA|C|106
7O19|1|AA|G|107
7O19|1|AA|G|108
7O19|1|AA|A|109
7O19|1|AA|C|110
7O19|1|AA|G|111
7O19|1|AA|G|112
7O19|1|AA|G|113
*
7O19|1|AA|C|314
7O19|1|AA|A|315
7O19|1|AA|C|316
*
7O19|1|AA|G|337
7O19|1|AA|A|338
7O19|1|AA|C|339
*
7O19|1|AA|G|350
7O19|1|AA|G|351
7O19|1|AA|C|352
7O19|1|AA|A|353
7O19|1|AA|G|354
Current chains
- Chain AA
- Ribosomal RNA 16S
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AT
- 30S ribosomal protein S20
- Chain BK
- 50S ribosomal protein L14
- Chain BP
- 50S ribosomal protein L19
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