J5_7TTW_009
3D structure
- PDB id
- 7TTW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUA*UUUG*CG*CG*CGGAUAAAA
- Length
- 21 nucleotides
- Bulged bases
- 7TTW|1|1|U|2103, 7TTW|1|1|G|2455, 7TTW|1|1|G|2456, 7TTW|1|1|A|2457, 7TTW|1|1|U|2458
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7TTW_009 not in the Motif Atlas
- Homologous match to J5_4WF9_007
- Geometric discrepancy: 0.106
- The information below is about J5_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_39529.2
- Basepair signature
- cWW-cWH-cWH-F-cWW-F-F-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7TTW|1|1|U|2101
7TTW|1|1|U|2102
7TTW|1|1|U|2103
7TTW|1|1|A|2104
*
7TTW|1|1|U|2270
7TTW|1|1|U|2271
7TTW|1|1|U|2272
7TTW|1|1|G|2273
*
7TTW|1|1|C|2285
7TTW|1|1|G|2286
*
7TTW|1|1|C|2308
7TTW|1|1|G|2309
*
7TTW|1|1|C|2454
7TTW|1|1|G|2455
7TTW|1|1|G|2456
7TTW|1|1|A|2457
7TTW|1|1|U|2458
7TTW|1|1|A|2459
7TTW|1|1|A|2460
7TTW|1|1|A|2461
7TTW|1|1|A|2462
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L27
- Chain J
- 50S ribosomal protein L28
- Chain Q
- 50S ribosomal protein L35
- Chain X
- 50S ribosomal protein L15
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