J5_8CRX_007
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GC*GAGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 8CRX|1|a|U|1332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_8CRX_007 not in the Motif Atlas
- Homologous match to J5_5J7L_015
- Geometric discrepancy: 0.0764
- The information below is about J5_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_74302.5
- Basepair signature
- cWW-tSH-tSS-tHW-F-cHS-F-tWS-cWW-cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8CRX|1|a|C|667
8CRX|1|a|G|668
8CRX|1|a|A|669
8CRX|1|a|G|670
8CRX|1|a|U|671
8CRX|1|a|U|672
*
8CRX|1|a|A|753
8CRX|1|a|G|754
8CRX|1|a|A|755
8CRX|1|a|C|756
*
8CRX|1|a|G|894
8CRX|1|a|U|895
8CRX|1|a|U|896
8CRX|1|a|C|897
*
8CRX|1|a|G|1272
8CRX|1|a|C|1273
*
8CRX|1|a|G|1327
8CRX|1|a|A|1328
8CRX|1|a|G|1329
8CRX|1|a|A|1330
8CRX|1|a|A|1331
8CRX|1|a|U|1332
8CRX|1|a|G|1333
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain e
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
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