Motif HL_02621.1 Version HL_02621.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8GLP_004 | 8GLP | 0.0000 | 2 | L5 | LSU rRNA | C | 131 | G | 132 | C | 133 | G | 134 | G | 137 | cWW |
| 2 | HL_9IMB_001 | 9IMB | 0.7295 | 5 | C | RNA (24-mer) | U | 8 | C | 9 | A | 10 | U | 11 | A | 17 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCGGCG | 1 |
| UCAUCUCCAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCGGC | 1 |
| CAUCUCCA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.73 | Avg 0.36 | Max 0.73
Coloring options: