#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5 6 7 8 9 101-102-94-74-85-78-9
1 HL_3IVN_0013IVN0.19201AA21U22G23A24U25A26G28G29U30U31cWWcwWncSs
2 HL_1Y26_0011Y260.14221XA30U31G32A33U34A35G37G38U39U40cWWcwWncsSncSs
3 HL_4LX6_0014LX60.12051AA30U31G32A33U34A35G37G38U39U40cWWcwWncSs
4 HL_3LA5_0013LA50.07231AA30U31G32A33U34A35G37G38U39U40cWWcwWncSs
5 HL_5SWD_0045SWD0.00001BA30U31G32A33U34A35G37G38U39U40cWWcwWncSs
6 HL_4ATO_0034ATO0.78241GU15||||3_445U16||||3_445A17||||3_445C18||||3_445C19||||3_445G20||||3_445A22||||3_445G23||||3_445U24||||3_445A25||||3_445cWWcwWcSH
7 HL_4ATO_0014ATO0.78241GU15U16A17C18C19G20A22G23U24A25cWWcwWcSH
8 HL_4ATO_0024ATO0.78241GU15||||2_455U16||||2_455A17||||2_455C18||||2_455C19||||2_455G20||||2_455A22||||2_455G23||||2_455U24||||2_455A25||||2_455cWWcwWcSH
9 HL_2D6F_0042D6F0.84092FG912U913A914G915U916G917A920A921U922C923cWWncwWncWS

3D structures

Complete motif including flanking bases
SequenceCounts
AUGAUAUGGUU5
UUACCGUAGUA3
GUAGUGGUAAUC1
Non-Watson-Crick part of the motif
SequenceCounts
UGAUAUGGU5
UACCGUAGU3
UAGUGGUAAU1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.53
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (9)
  • Basepair signature
    cWW-cWW-R-cSS-cSS-R
    Heat map statistics
    Min 0.06 | Avg 0.49 | Max 0.85
    Help

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