Motif HL_04630.1 Version HL_04630.1 of this group appears in releases 0.2 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DIR_003 | 3DIR | 0 | 0 | A | Lysine riboswitch | G | 124 | G | 125 | A | 126 | A | 127 | U | 128 | A | 129 | C | 130 | cWW | ntSH | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAUA | 1 |
Release history
| Release | 0.2 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_04630.1 | Only in the parent motif |
|---|---|---|---|
| HL_41237.1 Compare | HL_3DIR_003 | HL_1S72_006, HL_3O58_001, HL_3PYO_006, HL_2ZJR_006, HL_2QBG_008 |
Children motifs
| Child motif | Common motif instances | Only in HL_04630.1 | Only in the child motif |
|---|---|---|---|
| HL_87844.1 Compare | HL_3DIR_003 | HL_3V2F_006, HL_4A1B_001, HL_2QBG_022, HL_2QBG_008, HL_3V2F_021, HL_1S72_006, HL_3U5H_001, HL_2ZJR_006 |
Coloring options: