#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 61-62-5
1 HL_9BZC_0029BZC0.00002ARNA (87-MER)U54U55A56U59U60A61cWW
2 HL_5ZQ8_0025ZQ80.96744DRNA (12-mer)C744G745U746A751A752G753cWWtHH

3D structures

Complete motif including flanking bases
SequenceCounts
UUAUCUUA1
CGUGAAAAG1
Non-Watson-Crick part of the motif
SequenceCounts
UAUCUU1
GU(MUM)GAAAA1

Release history

Release3.913.923.933.94
Date2024-12-042025-01-012025-01-292025-02-26
StatusNew id, 1 parentExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-F-F-F-F-F
    Heat map statistics
    Min 0.97 | Avg 0.48 | Max 0.97
    Help

    Coloring options:

    HL_9BZC_002:HL_9BZC_002 = 0HL_9BZC_002:HL_5ZQ8_002 = 0.9674HL_5ZQ8_002:HL_9BZC_002 = 0.9674HL_5ZQ8_002:HL_5ZQ8_002 = 0HL_9BZC_002HL_5ZQ8_002Discrepancy0.000.200.400.600.80
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