#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_1OOA_0011OOA0.00001CRNA aptamerU13G14U15A17G18cWWntSH
2 HL_2Y9H_0052Y9H0.88523JRNA (19-mer)A10C11G12G16U17cWWncWH

3D structures

Complete motif including flanking bases
SequenceCounts
UGUAAG1
ACGCGUGU1
Non-Watson-Crick part of the motif
SequenceCounts
GUAA1
CGCGUG1

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.47
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-21
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-cWH-R
    Heat map statistics
    Min 0.89 | Avg 0.44 | Max 0.89
    Help

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