Motif HL_05727.1 Version HL_05727.1 of this group appears in releases 3.77 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S03_001 | 1S03 | 0.0000 | 3 | A | A | 22 | G | 23 | A | 26 | A | 27 | U | 29 | cWW | |
| 2 | HL_7A0S_002 | 7A0S | 0.5727 | 6 | X | C | 85 | U | 86 | A | 93 | C | 94 | G | 95 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGCAAUU | 1 |
| CUGGAGAUACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCAAU | 1 |
| UGGAGAUAC | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.57 | Avg 0.29 | Max 0.57
Coloring options: