Motif HL_06569.2 Version HL_06569.2 of this group appears in releases 3.54 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4C9D_002 | 4C9D | 0.3515 | 0 | D | R3 REPEAT RNA CLEAVAGE PRODUCT | C | 21 | G | 22 | U | 23 | A | 24 | G | 25 | ncWW | ||
| 2 | HL_7RQB_007 | 7RQB | 0.2283 | 1 | 1A | LSU rRNA | A | 225 | G | 226 | A | 227 | A | 228 | U | 230 | cWW | ||
| 3 | HL_7A0S_007 | 7A0S | 0.0000 | 1 | X | LSU rRNA | A | 202 | G | 203 | A | 204 | A | 205 | U | 207 | cWW | cSW | |
| 4 | HL_5TBW_075 | 5TBW | 0.5610 | 2 | 4 | 5.8S rRNA | C | 108 | A | 109 | C | 110 | U | 112 | G | 114 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAG | 1 |
| AGAAAU | 1 |
| AGAAUU | 1 |
| CACAUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA | 1 |
| GAAA | 1 |
| GAAU | 1 |
| ACAUU | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: