Motif HL_07372.1 Version HL_07372.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5X2G_002 | 5X2G | 0.5086 | 1 | B | sgRNA | G | 54 | U | 55 | U | 56 | U | 57 | G | 58 | C | 59 | G | 60 | G | 61 | G | 62 | C | 64 | cWW | ncSH | |
| 2 | HL_7MKY_001 | 7MKY | 0.0000 | 2 | A | RNA (66-MER) | G | 9 | U | 10 | G | 11 | A | 13 | G | 14 | C | 15 | C | 16 | C | 17 | G | 18 | C | 20 | cWW | cBW | |
| 3 | HL_4V88_209 | 4V88 | 0.9800 | 0 | A6 | SSU rRNA | U | 1055 | U | 1056 | U | 1057 | U | 1058 | U | 1059 | U | 1060 | A | 1061 | A | 1062 | U | 1063 | G | 1064 | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUGCGGGAC | 1 |
| GUGCAGCCCGUC | 1 |
| UUUUUUAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUGCGGGA | 1 |
| UGCAGCCCGU | 1 |
| UUUUUAAU | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.51 | Avg 0.55 | Max 1.00
Coloring options: