#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 7 81-82-62-73-53-6
1 HL_6UFM_0066UFM0.71740PseudoknotBG80G81U82G83A84G85C86C87cWWncSH
2 HL_1H3E_0021H3E0.23461tRNA anticodon loopBU31C32U33G34A36A37A38A39cWWncWB
3 HL_5UD5_0025UD50.00001tRNA anticodon loopCA31C32U33C34A36A37A38U39cWWncWWntSH
4 HL_4V9F_0324V9F0.20021Anticodon loop related0A1274C1275U1276C1277A1278A1280C1281U1282cWWcWBntSH
5 HL_7PMQ_0037PMQ0.35540Anticodon loop relatedFG8U9U10U11C12G13A14C15cWW
6 HL_6UFM_0046UFM0.62040Pseudoknot geometryBG13C14C15A16U17C18A19C20cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGUGAGCC1
UCUGAAAA1
ACUCUAAAU1
ACUCAUACU1
GUUUCGAC1
GCCAUCAC1
Non-Watson-Crick part of the motif
SequenceCounts
GUGAGC1
CUG(PSU)AAA1
CUCUAAA1
CUCAUAC1
UUUCGA1
CCAUCA1

Release history

Release3.913.923.933.94
Date2024-12-042025-01-012025-01-292025-02-26
StatusUpdated, 2 parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA anticodon loop (2)
  • Anticodon loop related (2)
  • Pseudoknot geometry (1)
  • Pseudoknot (1)
  • Basepair signature
    cWW-F-F-F-F-F-F
    Heat map statistics
    Min 0.20 | Avg 0.44 | Max 0.79
    Help

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