Motif HL_11542.1 Version HL_11542.1 of this group appears in releases 3.95 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WZD_218 | 4WZD | 0.0000 | 3 | 3L | tRNA | C | 12||||P_1 | G | 13||||P_1 | A | 14||||P_1 | G | 15||||P_1 | C | 19||||P_1 | C | 20||||P_1 | A | 21||||P_1 | A | 22||||P_1 | A | 23||||P_1 | G | 24||||P_1 | cWW | tSH | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAGCGCCAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGC(OMG)GCCAAA | 1 |
Release history
| Release | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: