Motif HL_18565.1 Version HL_18565.1 of this group appears in releases 3.91 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5WT1_002 | 5WT1 | 0.0000 | 3 | C | tRNA | A | 31 | C | 32 | A | 35 | A | 36 | A | 38 | U | 39 | cWW | ncWW |
| 2 | HL_2ZZN_005 | 2ZZN | 0.7349 | 3 | D | RNA (71-MER) | A | 31 | C | 32 | C | 35 | A | 36 | A | 38 | U | 39 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUGAAGAU | 1 |
| ACUGCAGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGAAGA | 1 |
| CUGCAGA | 1 |
Release history
| Release | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|
| Date | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-F-F-F-F
- Heat map statistics
- Min 0.73 | Avg 0.37 | Max 0.73
Coloring options: