Motif HL_22758.3 Version HL_22758.3 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8GLP_121 | 8GLP | 0.2985 | 1 | L5 | LSU rRNA | G | 2624 | U | 2625 | U | 2626 | C | 2627 | U | 2628 | C | 2629 | U | 2630 | PSU | 2632 | cWW | ncwW | |
| 2 | HL_8OI5_033 | 8OI5 | 0.1001 | 1 | 1 | LSU rRNA | G | 1676 | U | 1677 | U | 1678 | A | 1679 | U | 1680 | C | 1681 | U | 1682 | U | 1684 | cWW | ncwW | |
| 3 | HL_9PN5_036 | 9PN5 | 0.0000 | 1 | A1 | LSU rRNA | G | 1680 | U | 1681 | U | 1682 | A | 1683 | U | 1684 | C | 1685 | U | 1686 | U | 1688 | cWW | ||
| 4 | HL_9AXU_034 | 9AXU | 0.1055 | 1 | 2 | LSU rRNA | G | 1715 | U | 1716 | U | 1717 | C | 1718 | U | 1719 | C | 1720 | U | 1721 | U | 1723 | cWW | ||
| 5 | HL_9H3G_041 | 9H3G | 0.1516 | 1 | A | LSU rRNA | G | 1680 | PSU | 1681 | U | 1682 | A | 1683 | U | 1684 | C | 1685 | U | 1686 | U | 1688 | ncWW | ncwW | |
| 6 | HL_9E6Q_036 | 9E6Q | 0.5133 | 0 | 1 | LSU rRNA | A | 1600 | C | 1601 | U | 1602 | G | 1603 | C | 1604 | C | 1605 | G | 1606 | U | 1607 | cWW | ntWW | |
| 7 | HL_9PN5_103 | 9PN5 | 0.7841 | 0 | B5 | SSU rRNA | G | 1295 | A | 1296 | G | 1297 | U | 1298 | G | 1299 | A | 1300 | U | 1301 | U | 1302 | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAUCUUU | 2 |
| GUUCUCUU(PSU) | 1 |
| GUUCUCUUU | 1 |
| G(PSU)UAUCUUU | 1 |
| ACUGCCGU | 1 |
| GAGUGAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCUCUU | 2 |
| UUAUCUU | 2 |
| (PSU)UAUCUU | 1 |
| CUGCCG | 1 |
| AGUGAU | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (7)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.10 | Avg 0.40 | Max 0.95
Coloring options: