Motif HL_24179.1 Version HL_24179.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1KOG_007 | 1KOG | 0.0000 | 2 | O | Threonyl-tRNA synthetase mRNA | U | 82 | U | 83 | U | 84 | C | 85 | G | 86 | U | 87 | G | 90 | cWW | cSH |
| 2 | HL_1QF6_002 | 1QF6 | 0.3911 | 2 | B | tRNA | A | 31 | U | 32 | U | 33 | C | 34 | G | 35 | U | 36 | U | 39 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUCGUGUG | 1 |
| AUUCGUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCGUGU | 1 |
| UUCGU(AET)A | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-cSH-F-F
- Heat map statistics
- Min 0.39 | Avg 0.20 | Max 0.39
Coloring options: