Motif HL_24179.1 Version HL_24179.1 of this group appears in releases 4.1 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1QF6_002 | 1QF6 | 0.0000 | 4 | B | tRNA | A | 31 | U | 32 | G | 35 | U | 36 | U | 39 | cWW | cSH |
| 2 | HL_1KOG_007 | 1KOG | 0.3911 | 4 | O | Threonyl-tRNA synthetase mRNA | U | 82 | U | 83 | G | 86 | U | 87 | G | 90 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUCGUAU | 1 |
| UUUCGUGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCGU(AET)A | 1 |
| UUCGUGU | 1 |
Release history
| Release | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|
| Date | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-cSH-F-F
- Heat map statistics
- Min 0.39 | Avg 0.20 | Max 0.39
Coloring options: