Motif HL_31581.2 Version HL_31581.2 of this group appears in releases 3.16 to 3.26
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 9-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4PRF_002 | 4PRF | 0.0682 | 0 | B | Hepatitis Delta virus ribozyme | C | 147 | A | 148 | U | 149 | U | 150 | G | 151 | C | 152 | A | 153 | C | 154 | U | 155 | C | 156 | C | 157 | G | 158 | cWW | cSH | |
| 2 | HL_4PR6_002 | 4PR6 | 0.0000 | 0 | B | HDV RIBOZYME SELF-CLEAVED | C | 147 | A | 148 | U | 149 | U | 150 | G | 151 | C | 152 | A | 153 | C | 154 | U | 155 | C | 156 | C | 157 | G | 158 | cWW | cSH | |
| 3 | HL_5DDO_004 | 5DDO | 0.7495 | 0 | B | L-glutamine riboswitch (58-MER) | C | 34 | A | 35 | U | 36 | U | 37 | G | 38 | C | 39 | A | 40 | C | 41 | U | 42 | C | 43 | C | 44 | G | 45 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUGCACUCCG | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUGCACUCC | 3 |
Release history
| Release | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-R-cSH-R-R-R-R-R-R
- Heat map statistics
- Min 0.07 | Avg 0.35 | Max 0.75
Coloring options: