#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_7A0S_0587A0S0.57315 X LSU rRNAC2383G2384A2390A2391G2392cWWtSH
2 HL_4WF9_0554WF90.51845 X LSU rRNAC2431G2432A2438A2439G2440cWWtSH
3 HL_8VTW_0588VTW0.48915 1A LSU rRNAC2404G2405A2411A2412G2413cWWtSH
4 HL_5J7L_1925J7L0.46325 DA LSU rRNAU2404G2405A2411A2412G2413cWWtSH
5 HL_7A0S_0057A0S0.39911 X LSU rRNAC146G147A149A150G151cWWtSH
6 HL_3IGI_0043IGI0.34982 AGroup IIC intronG135G136C139A140C141cWWtSH
7 HL_6ASO_0016ASO0.27012 I U6 snRNAU70G71U74A75A76cWWtSH
8 HL_8DP3_0038DP30.00001 RRNA (90-MER)U62C63C65C66G67cWWntSH
9 HL_4LFB_0024LFB0.28102 A SSU rRNAG80U81U84A88C89cWWntSH
10 HL_4QLM_0014QLM0.32971GNRAA cyclic di-AMP riboswitchC54G55A57A58G59cWWtSH
11 HL_7Z4D_0037Z4D0.42271 AsgRNAU72G73A75A76A77cWWntSH
12 HL_4V9F_0224V9F0.33551Other HL0 LSU rRNAU733U734A736A737G738cWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
CGUGUGGAAG2
CGCAUGGAAG1
UGAAUGGAAG1
CGCAAG1
GGAACAC1
UGCAUAA1
UCACCG1
GUUUUAC1
CGAAAG1
UGAAAA1
UUCAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUGUGGAA2
GAAA2
GCAUGGAA1
GAAUGGAA1
GCAA1
GAACA1
GCAUA1
CACC1
UUUUA1
UCAA1

Release history

Release3.87
Date2024-08-14
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • GNRA (1)
  • Other HL (1)
  • Basepair signature
    cWW-tSH-F
    Heat map statistics
    Min 0.13 | Avg 0.36 | Max 0.61
    Help

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