Motif HL_41181.1 Version HL_41181.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_2W2H_001 | 2W2H | 0.0000 | 3 | R | RNA (21-mer) | U | 10 | C | 12 | U | 13 | G | 16 | G | 17 | ncWW | |
2 | HL_2Y9H_005 | 2Y9H | 0.6047 | 3 | J | RNA (19-mer) | A | 10 | C | 11 | G | 12 | G | 16 | U | 17 | cWW | ncWH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUCUGCGG | 1 |
ACGCGUGU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UCUGCG | 1 |
CGCGUG | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.60 | Avg 0.30 | Max 0.60
Coloring options: