#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 31-3
1 HL_4OQU_0024OQU0.47846ASAM-I/IV riboswitchG32C38C40cWW
2 HL_8VTW_0378VTW0.367641A LSU rRNAG1492A1496C1498cWW
3 HL_5J7L_1705J7L0.28764DA LSU rRNAG1492A1496C1498cWW
4 HL_5TBW_0325TBW0.218641 LSU rRNAA1506G1510U1512cWW
5 HL_8C3A_0328C3A0.215641 LSU rRNAA1502G1506U1508cWW
6 HL_7A0S_0337A0S0.00004X LSU rRNAG1337G1341C1343cWW
7 HL_8VTW_0338VTW0.059041A LSU rRNAG1324G1328C1330cWW
8 HL_4WF9_0334WF90.10924X LSU rRNAG1361G1365C1367cWW
9 HL_4V9F_0354V9F0.166440 LSU rRNAG1430A1434C1436cWW
10 HL_5J7L_1665J7L0.25444DA LSU rRNAG1324A1328C1330cWW
11 HL_8VTW_0518VTW0.192031A LSU rRNAC2205A2208G2219cWW
12 HL_3BT7_0023BT70.54246DRNA (19-mer)G53A58C61cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCAAAUC2
AGCAGUU2
GGUCGUC2
GACGGACAC1
GCUCGUC1
GCUGAUC1
GUUAAUC1
CGGAUG1
GUCGAUCC1
Non-Watson-Crick part of the motif
SequenceCounts
CAAAU2
GCAGU2
GUCGU2
ACGGACA1
CUCGU1
CUGAU1
UUAAU1
GGAU1
(5MU)UCGAUC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (12)
  • Basepair signature
    cWW-F
    Heat map statistics
    Min 0.06 | Avg 0.30 | Max 0.67
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