Motif HL_49687.1 Version HL_49687.1 of this group appears in releases 3.91 to 3.94

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5	1-5
1	HL_6N5P_002	6N5P	0.4305	2	A	cyclic di-AMP riboswitch	G	58	U	59	A	62	G	63	C	64	ncWW
2	HL_2A64_001	2A64	0.0000	1	A	ribonuclease P RNA	G	31	G	32	U	34	U	35	C	36	cWW
3	HL_3NDB_001	3NDB	0.5646	1	M	SRP RNA	U	162	G	163	A	165	G	166	G	167	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GUGAAGC	1
GGUUUC	1
UGUAGG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGAAG	1
GUUU	1
GUAG	1

Release history

Release	3.91	3.92	3.93	3.94
Date	2024-12-04	2025-01-01	2025-01-29	2025-02-26
Status	New id, 1 parent	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-F-F-F
Heat map statistics: Min 0.43 | Avg 0.39 | Max 0.75

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