#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-62-73-5
1 HL_5AH5_0055AH50.10175tRNA Leu D-loopD tRNAG12A13A14A15A20|||AA21A22C23cWWcWStSHcWS
2 HL_3ZGZ_0013ZGZ0.00005tRNA Leu D-loopB tRNAG12G13A14A15A20|||AG21A22C23cWWcWStSHcWS
3 HL_2BTE_0012BTE0.08595tRNA Leu D-loopB tRNAG12G13A14A15A20|||AG21A22C23cWWcWStSHcWS

3D structures

Complete motif including flanking bases
SequenceCounts
GAAAUCGGUAAAC1
GGAAUCGGUAGAC1
GGAAUGGGUAGAC1
Non-Watson-Crick part of the motif
SequenceCounts
AAAUCGGUAAA1
GAAUCGGUAGA1
GAAUGGGUAGA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA Leu D-loop (3)
  • Basepair signature
    cWW-tSH-cWS-cWS-R
    Heat map statistics
    Min 0.09 | Avg 0.07 | Max 0.12
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