Motif HL_53099.1 Version HL_53099.1 of this group appears in releases 3.89 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 4-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WF9_013 | 4WF9 | 0.0000 | 4 | X | LSU rRNA | A | 427 | G | 428 | A | 430 | C | 431 | G | 434 | A | 436 | A | 437 | U | 438 | U | 439 | cWW | ntsS |
| 2 | HL_8C3A_236 | 8C3A | 0.9120 | 1 | CM | SSU rRNA | U | 1040 | C | 1041 | U | 1043 | U | 1044 | U | 1045 | A | 1046 | U | 1047 | U | 1048 | G | 1049 | ncWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGCACGUGAAAUU | 1 |
| UCUUUUAUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCACGUGAAAU | 1 |
| CUUUUAUU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.91 | Avg 0.46 | Max 0.91
Coloring options: