Motif HL_57052.2 Version HL_57052.2 of this group appears in releases 3.12 to 3.61

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3	1-3
1	HL_4L8H_001	4L8H	0.4491	2	Mini UNCG	R	RNA operator hairpin	C	9	A	11	G	13	cWW
2	HL_4YAZ_004	4YAZ	0.2080	2	Mini UNCG	R	Cyclic di-GMP-I riboswitch	C	56	C	58	G	60	cWW
3	HL_6MSF_005	6MSF	0.0000	2		R	RNA (14-mer)	G	6\|\|\|\|P_P	C	8\|\|\|\|P_P	C	10\|\|\|\|P_P
4	HL_6MSF_001	6MSF	0.0000	2	Mini UNCG	R	RNA (14-mer)	G	6\|\|\|\|P_1	C	8\|\|\|\|P_1	C	10\|\|\|\|P_1	cWW
5	HL_6MSF_006	6MSF	0.0977	2		S	RNA (10-mer)	G	6\|\|\|\|P_P	C	8\|\|\|\|P_P	C	10\|\|\|\|P_P
6	HL_6MSF_002	6MSF	0.0977	2	Mini UNCG	S	RNA (10-mer)	G	6\|\|\|\|P_1	C	8\|\|\|\|P_1	C	10\|\|\|\|P_1	cWW
7	HL_4LFB_005	4LFB	0.1422	2	Mini UNCG	A	SSU rRNA	C	201	U	203	G	216	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GUCAC	4
CUAAG	1
CCCUG	1
CUUUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UCA	4
UAA	1
CCU	1
UUU	1

Release history

Release	3.12	3.13	3.14	3.15	3.16	3.17	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47	3.48	3.49	3.50	3.51	3.52	3.53	3.54	3.55	3.56	3.57	3.58	3.59	3.60	3.61
Date	2018-11-16	2018-12-14	2019-01-11	2019-02-08	2019-03-08	2019-04-05	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05	2022-02-02	2022-03-02	2022-03-30	2022-04-27	2022-05-25	2022-06-22	2022-07-20	2022-08-17
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Mini UNCG (5)
(2)
Basepair signature: cWW
Heat map statistics: Min 0.10 | Avg 0.20 | Max 0.50

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