#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_4L8H_0014L8H0.44912 RRNA operator hairpinC9A11G13cWW
2 HL_4YAZ_0044YAZ0.20802 RCyclic di-GMP-I riboswitchC56C58G60cWW
3 HL_6MSF_0056MSF0.00002 RRNA (14-mer)G6||||P_PC8||||P_PC10||||P_P
4 HL_6MSF_0016MSF0.00002 RRNA (14-mer)G6||||P_1C8||||P_1C10||||P_1cWW
5 HL_6MSF_0066MSF0.09772 SRNA (10-mer)G6||||P_PC8||||P_PC10||||P_P
6 HL_6MSF_0026MSF0.09772 SRNA (10-mer)G6||||P_1C8||||P_1C10||||P_1cWW
7 HL_4LFB_0054LFB0.14222 A SSU rRNAC201U203G216cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUCAC4
CUAAG1
CCCUG1
CUUUG1
Non-Watson-Crick part of the motif
SequenceCounts
UCA4
UAA1
CCU1
UUU1

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW
Heat map statistics
Min 0.10 | Avg 0.20 | Max 0.50
Help

Coloring options:

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