Motif HL_60340.1 Version HL_60340.1 of this group appears in releases 3.93 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_9IMB_001 | 9IMB | 0.0000 | 5 | C | RNA (24-mer) | U | 8 | C | 9 | A | 10 | U | 11 | A | 17 | cWW |
| 2 | HL_4KR9_002 | 4KR9 | 0.6338 | 1 | M | RNA (39-MER) | G | 19 | G | 20 | A | 21 | A | 22 | C | 24 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCAUCUCCAA | 1 |
| GGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAUCUCCA | 1 |
| GAAA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.63 | Avg 0.32 | Max 0.63
Coloring options: