#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-5
1 HL_4WF9_0384WF90.11043X LSU rRNAC1656G1657C1659C1661G1663cWW
2 HL_4Y4O_1424Y4O0.000032A LSU rRNAC1612G1613C1615C1617G1619cWW
3 HL_4IOA_0394IOA0.08813X LSU rRNAC1628G1629C1631C1633G1635cWW
4 HL_4V9F_0424V9F0.129330 LSU rRNAC1687G1688C1690C1692G1694cWW
5 HL_5TBW_0415TBW0.192631 LSU rRNAC1844G1845A1847C1849G1851cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGACACAG4
CGCAGCAG1
Non-Watson-Crick part of the motif
SequenceCounts
GACACA4
GCAGCA1

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.47
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-21
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-R-R
    Heat map statistics
    Min 0.09 | Avg 0.12 | Max 0.22
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