Motif HL_68791.1 Version HL_68791.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8P9A_150 | 8P9A | 0.7248 | 1 | AR | LSU rRNA | C | 1759 | A | 1760 | C | 1761 | U | 1763 | U | 1764 | U | 1765 | G | 1766 | cWW | |
| 2 | HL_8GLP_100 | 8GLP | 0.0000 | 2 | S2 | SSU rRNA | C | 833 | C | 834 | C | 835 | G | 836 | A | 837 | G | 838 | G | 841 | cWW | ncWW |
| 3 | HL_2CSX_002 | 2CSX | 0.7558 | 2 | C | RNA (75-MER) | U | 31 | C | 32 | U | 33 | C | 34 | A | 35 | A | 38 | G | 39 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CACCUUUG | 1 |
| CCCGAGCCG | 1 |
| UCUCAUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACCUUU | 1 |
| CCGAGCC | 1 |
| CUCAUAA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.72 | Avg 0.52 | Max 0.84
Coloring options: