#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_8J72_0018J720.41692 ClncRNA Trincr1C4A7G8cWW
2 HL_4ZLD_0014ZLD0.06892 BRNA (17-mer)C7G9G11cWW
3 HL_4Z31_0014Z310.05342 ERNA (15-mer)C6G8G10cWW
4 HL_4QIL_0024QIL0.00002 CRNA (19-mer)C8G10G12cWW
5 HL_4QI2_0034QI20.11742 GRNA (23-mer)C10G12G14cWW
6 HL_6TQB_0016TQB0.33422 BRNA (19-mer)A10A12U14cWW
7 HL_6TQA_0036TQA0.39022 GRNA (21-mer)A9A11U13cWW
8 HL_8SP9_0028SP90.44702 CtRNA scaffold,CVB3 Cloverleaf RNAC67U69G71cWW
9 HL_4V9F_0044V9F0.38222 0 LSU rRNAU125A128A129cWW
10 HL_8C3A_0728C3A0.59661 1 LSU rRNAC3315U3317G3318cWW
11 HL_4V9F_0214V9F0.75122 0 LSU rRNAC712U714G716cWW
12 HL_4L8H_0014L8H0.63072 RRNA operator hairpinC9A11G13cWW
13 HL_4V88_1924V880.65891 A6 SSU rRNAC276U278G279cWW
14 HL_7A0S_0177A0S0.62373 X LSU rRNAC553U557G558cWW
15 HL_5J7L_1695J7L0.57266 DA LSU rRNAC1451U1458G1459cWW
16 HL_5U30_0015U300.63271 BsgRNAU4G6A7cWW
17 HL_5TBW_0715TBW0.64401 1 LSU rRNAC3350U3352G3353cWW
18 HL_6CZR_0896CZR0.89152 1a SSU rRNAG822C824C826cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUGUG4
CUUG3
AUAUU2
CAAAG1
CAUUG1
UCUAA1
CUUUG1
CUAAG1
CUUAUG1
CGACGGUUG1
UAGA1
GUCUC1
Non-Watson-Crick part of the motif
SequenceCounts
UGU4
UU3
UAU2
AAA1
AUU1
CUA1
UUU1
UAA1
UUAU1
GACGGUU1
AG1
UCU1

Release history

Release3.87
Date2024-08-14
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-F
Heat map statistics
Min 0.05 | Avg 0.43 | Max 1.88
Help

Coloring options:

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