#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 31-3
1 HL_1ZBH_0011ZBH0.22943FRNA (20-mer)U11U14A16cWW
2 HL_8UIW_0048UIW0.15653NyjdF RNA (R. gauvreauii)U105U108A110cWW
3 HL_2ZUE_0022ZUE0.21346BtRNA-ArgC931A937G939cWW
4 HL_5T16_0025T160.13063HRNA substrate analogG16U19C21cWW
5 HL_4QOZ_0014QOZ0.00003Ahistone mRNA stem-loopU11U14A16cWW
6 HL_4TUW_0024TUW0.14233CHISTONE MRNA 3' STEM LOOPU13U16A18cWW
7 HL_5WTK_0015WTK0.31398BRNA (58-MER)C7A15G17cWW

3D structures

Complete motif including flanking bases
SequenceCounts
UUUUCA3
UCCUUA1
CCUCCUAAG1
GAGUCC1
CAAUAUCGAAG1
Non-Watson-Crick part of the motif
SequenceCounts
UUUC3
CCUU1
CUCCUAA1
AGUC1
AAUAUCGAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-F
    Heat map statistics
    Min 0.13 | Avg 0.22 | Max 0.49
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