Motif HL_89199.1 Version HL_89199.1 of this group appears in releases 3.89 to 3.93
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5DH6_001 | 5DH6 | 0.0839 | 1 | Mini UNCG | A | hammerhead ribozyme | C | 16 | G | 18 | A | 19 | U | 20 | G | 21 | cWW |
| 2 | HL_2QUW_002 | 2QUW | 0.0000 | 1 | Mini UNCG | B | Hammerhead ribozyme, cleaved fragment | C | 32 | G | 34 | A | 35 | U | 36 | G | 37 | cWW |
| 3 | HL_2QUS_002 | 2QUS | 0.0719 | 1 | Mini UNCG | A | Hammerhead ribozyme | C | 32 | G | 34 | A | 35 | U | 36 | G | 37 | cWW |
| 4 | HL_2OEU_001 | 2OEU | 0.1833 | 1 | Mini UNCG | A | Hammerhead Ribozyme | C | 15 | G | 17 | A | 18 | U | 19 | G | 20 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGAUG | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAU | 4 |
- Annotations
-
- Mini UNCG (4)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.07 | Avg 0.10 | Max 0.21
Coloring options: