#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 41-42-3
1 HL_6WBR_0026WBR0.71213BRNA (94-MER)C56U57G60G62
2 HL_4UYK_0034UYK0.58882RSRP RNAU98G99A101G103cWWntSW
3 HL_3SIU_0023SIU0.59753FU4atac snRNAC40G41U44G46cWW
4 HL_4V88_1904V880.30732A6 SSU rRNAC230U231G234G235ncWW
5 HL_8S95_0038S950.00003CLysine tRNA scaffold,Poliovirus cloverleaf RNAC67C68G71G73cWWncWH
6 HL_6VMY_0046VMY0.20463ACobalamin riboswitchC287C288G291G293cWWncWH
7 HL_5WTI_0015WTI0.34123BRNA (123-MER)C12U13U16G18cWWcWH

3D structures

Complete motif including flanking bases
SequenceCounts
CUUCGUG1
UGUAAG1
CGCAUAG1
CUUCGG1
CCACGUG1
CCAAGCG1
CUUUUGG1
Non-Watson-Crick part of the motif
SequenceCounts
UUCGU1
GUAA1
GCAUA1
UUCG1
CACGU1
CAAGC1
UUUUG1

Release history

Release3.88
Date2024-09-11
StatusUpdated, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.20 | Avg 0.48 | Max 0.88
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