#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 41-42-33-4
1 HL_5KK5_0015KK50.71912BRNA (40-MER)C-11U-10U-8G-6cWWncWS
2 HL_3DH3_0033DH30.16102Fstem loop fragment of E. Coli 23S RNAC2594G2595A2598G2599cWWtSW
3 HL_3DH3_0013DH30.00002Estem loop fragment of E. Coli 23S RNAC2594G2595A2598G2599cWWtSW
4 HL_4U7U_0014U7U0.30642UNCGLcrRNAC51G52A55G56cWWtSW
5 HL_7A0S_0197A0S0.48102X LSU rRNAU622G623A626A627cWWntsS
6 HL_8VTW_0188VTW0.511431A LSU rRNAC612G613A614|||CG615cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGUGAG2
CUCUUG1
CGCCAG1
UGAAAA1
CGUUGAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUGA2
UCUU1
GCCA1
GAAA1
GUUGA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • UNCG (1)
  • Basepair signature
    cWW-F-F
    Heat map statistics
    Min 0.16 | Avg 0.42 | Max 0.74
    Help

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