#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-42-115-85-116-76-107-9
1 IL_1S72_1001S7202Minor groove platform related (H)9 5S rRNAG21G22G25C26C27U28*A54U55A56A57G58C59cWWntSWncWBcWWcSWcWWntSWncSH

3D structures

Complete motif including flanking bases
SequenceCounts
GGUUGCCU*AUAAGC1
Non-Watson-Crick part of the motif
SequenceCounts
GUUGCC*UAAG1

Release history

Release0.10.20.30.40.5
Date2011-12-082011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_00209.1Only in the child motif
IL_12211.1
Compare
IL_1S72_100IL_3U5H_144
Annotations
  • Minor groove platform related (H) (1)
  • Basepair signature
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.0994 s