#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_4WF9_0544WF90.30121Other ILX LSU rRNAC1624U1625A1626G1627*C1461G1462A1463G1465cWWcWW
2 IL_6DME_0016DME0.22432tSH-tHWAppGpp RiboswitchC11U12A13G14*C40A41A42G45cWWntWWtHScWW
3 IL_5T83_0015T830.18972tSH-tHWAGuanidine-I riboswitchC12U13A14G15*C42A43A44G47cWWtWHtHScWW
4 IL_6DLR_0016DLR0.15672tSH-tHWAGuanidine-I riboswitchC12U13A14G15*C45A46A47G50cWWtWHtHScWW
5 IL_6CK5_0016CK50.15232tSH-tHWAGuanidine-I riboswitchC12U13A14G15*C45G46A47G50cWWtWHtHScWW
6 IL_5U3G_0015U3G0.11342tSH-tHWBGuanidine-I riboswitchC6U7A8G9*C30G31A32G35cWWtWHtHScWW
7 IL_5J7L_2975J7L0.00001tSH-tHWDA LSU rRNAC1437U1438A1439U1440*A1551A1552A1553G1555cWWtWHtHScWW
8 IL_7MLW_0027MLW0.11402FGuanidine-I riboswitchC7U8A9G10*C51G52A53G56cWWtWHtHScWW
9 IL_7A0S_0537A0S0.13621tSH-tHWX LSU rRNAC1451U1452A1453U1454*A1567A1568A1569G1571cWWtWHtHScWW
10 IL_3NDB_0073NDB0.24263tSH-tHWM SRP RNAG223U224A225G226*C192G193A194C198cWWtWHtHScWW
11 IL_8VTW_0568VTW0.15501tSH-tHW (H)1A LSU rRNAC1437U1438A1439G1440*C1551G1552A1553G1555cWWtWHtHScWW
12 IL_8VTW_0108VTW0.21441tSH-tHW (H)1A LSU rRNAA357U358A359G360*C280G281A282U284cWWtWHtHScWW
13 IL_2ZY6_0012ZY60.51771tSH-tHWAphenylalanyl transfer RNAA7U8A9G10*C25G26A27U29cWWtWHntHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAG*CGAGAG2
CUAG*CGAUG1
CUAG*CAAGCG1
CUAG*CAAGAG1
CUAG*CAAGUG1
CUAG*CGAGCG1
CUAU*AAAUG1
CUAU*AAACG1
GUAG*CGAACCC1
CUAG*CGAAG1
AUAG*CGAAU1
AUAG*CGAGU1
Non-Watson-Crick part of the motif
SequenceCounts
UA*GAGA2
UA*GAA2
UA*GAU1
UA*AAGC1
UA*AAGA1
UA*AAGU1
UA*GAGC1
UA*AAU1
UA*AAC1
UA*GAACC1
UA*GAG1

Release history

Release3.873.88
Date2024-08-142024-09-11
StatusUpdated, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tSH-tHW (9)
  • tSH-tHW (H) (2)
  • Other IL (1)
  • (1)
  • Basepair signature
    cWW-tWH-tHS-cWW
    Heat map statistics
    Min 0.11 | Avg 0.25 | Max 0.59
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