Motif IL_04105.1 Version IL_04105.1 of this group appears in releases 3.77 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 10-11 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_7VYX_003 | 7VYX | 0.0000 | 0 | C | sgRNA | C | 41 | C | 42 | A | 43 | U | 44 | A | 45 | C | 46 | C | 47 | U | 48 | U | 49 | G | 50 | * | C | 16 | C | 17 | U | 18 | C | 19 | A | 20 | G | 21 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CCAUACCUUG*CCUCAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CAUACCUU*CUCA | 1 |
Release history
Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWW-L-L-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: